非常全面的各个蛋白数据库链接
随着生物信息学、蛋白组学的发展,研究蛋白结构域,蛋白序列等研究越来越成为必备技能,因此,蛋白数据库的了解和使用越来越显得重要。对此,北京大学 医学部就列出了
随着生物信息学、蛋白组学的发展,研究蛋白结构域,蛋白序列等研究越来越成为必备技能,因此,蛋白数据库的了解和使用越来越显得重要。对此,北京大学 医学部就列出了各个蛋白相关数据库的链接,方便科研人员研究和使用。 通用数据库
MIPS - Protein sequences and complete genomic sequences |
PDB - Protein Data Bank |
PIR-international - Protein sequence database co-developed by NBRF, MiPS and JIPID |
SWISS-PROT - SWISS-PROT annotated protein sequence database |
蛋白多肽相关数据库
BioImage - European biological image database (contains microelectroscopic imaging data on macromolecules) |
BioMagResBank - Repository for data on proteins, peptides, and nucleic acids from NMR spectroscopy |
BLOCKS - BLOCKS database |
DOMO - Protein domain database (Automatically generated) |
Pfam - Protein families database (HMM derived) |
2D与3D结构数据库
BMM Domain Server - Biomolecular Modelling Laboratory (ICRF) protein domain server |
CATH - Univ College London BSM structural classification of proteins |
CCDC - Cambridge Crystallographic Data Center (Cambridge Stuctural Database (CSD)) |
NHGRI Homeodomain Resource - A prototype database for a large protein family |
SCOP - Structural classification of proteins |
PROTOMAP - An automatic hierarchical classification of SWISS-PROT proteins |
SWISS-3DIMAGE - 3D images of proteins and other biological macromolecules |
SWISS-MODEL Repository - Automatically generated protein models database |
TOPS - Topology cartoons diagrams |
The Molecules of Life |
生物大分子 数据库
ESTHER - Esterases, alpha/beta hydrolase enzyme and relatives |
The Ion Channel Network (ICN) |
NHGRI/NCBI Histone Sequence Database |
LIGAND |
Mol_R_Us - Molecule R Us, browser for PDB |
MPW - Metabolic pathways |
PROLYSIS - A protease and protease inhibitor Web server |
酶-代谢数据库
a protease and protease inhibitor Web server |
GenLink Multimedia Telomere Resource |
MEROPS - The MEROPS database provides a wealth of information on proteases. |
REBASE - restriction enzymes and methylases |
Telomere & Telomerase Reseach Information |
受体与信息传递数据库
G-Protein Coupled Receptor Database |
Olfactory Receptor DataBase |
ReLiBase - Receptor/ligand complexes database |
SENTRA : A Database of Sensory Signal Transduction Proteins |
SMART - Protein signalling and extracellular domain patterns |
蛋白种类关系数据库
DIP - Database of Interacting Proteins |
遗传变异数据库
Andogen Receptor Mutations Database |
Ataxia-Telangiectasia Mutation Database - Virginia Mason Research Center |
ATbase - A registry of patients with ataxia-telangiectasia |
ALPSbase - Autoimmune Lymphoproliferative Syndrome Database,a database of mutations causing human ALPS |
Fanconi Anemia Mutation Database |
IL2RGbase : Database of Mutations Causing Human X-Linked SCID (XSCID/X-SCID) |
Immunodeficiency Databases (IDbases) |
Keio mutation database for human disease gene mutations |
Mutation Databases - University of Tampere |
OMIM - Online Mendelian Inheritance in Man |
PMD - Protein Mutation database |
p53 Database |
Tetrahydrobiopterin - BH4 |
其它
DExH/PROTEIN DATABASE |
PRINTS - Protein Motif fingerprint database |
PRESAGE - Collaborative Database of experimental data on proteins |
ProDom - Protein domain database (Automatically generated) |
PROSITE - PROSITE dictionary of protein sites and patterns |
本文列举了蛋白相关数据库:除了大家比较熟悉的通用数据库如PDB、PIR,SWISS-PROT ,还有其他的如生物大分子数据库、受体与信息传递数据库,希望大家能受用。