非常全面的各个蛋白数据库链接
随着生物信息学、蛋白组学的发展,研究蛋白结构域,蛋白序列等研究越来越成为必备技能,因此,蛋白数据库的了解和使用越来越显得重要。对此,北京大学 医学部就列出了
随着生物信息学、蛋白组学的发展,研究蛋白结构域,蛋白序列等研究越来越成为必备技能,因此,蛋白数据库的了解和使用越来越显得重要。对此,北京大学 医学部就列出了各个蛋白相关数据库的链接,方便科研人员研究和使用。 通用数据库
| MIPS - Protein sequences and complete genomic sequences |
| PDB - Protein Data Bank |
| PIR-international - Protein sequence database co-developed by NBRF, MiPS and JIPID |
| SWISS-PROT - SWISS-PROT annotated protein sequence database |
蛋白多肽相关数据库
| BioImage - European biological image database (contains microelectroscopic imaging data on macromolecules) |
| BioMagResBank - Repository for data on proteins, peptides, and nucleic acids from NMR spectroscopy |
| BLOCKS - BLOCKS database |
| DOMO - Protein domain database (Automatically generated) |
| Pfam - Protein families database (HMM derived) |
2D与3D结构数据库
| BMM Domain Server - Biomolecular Modelling Laboratory (ICRF) protein domain server |
| CATH - Univ College London BSM structural classification of proteins |
| CCDC - Cambridge Crystallographic Data Center (Cambridge Stuctural Database (CSD)) |
| NHGRI Homeodomain Resource - A prototype database for a large protein family |
| SCOP - Structural classification of proteins |
| PROTOMAP - An automatic hierarchical classification of SWISS-PROT proteins |
| SWISS-3DIMAGE - 3D images of proteins and other biological macromolecules |
| SWISS-MODEL Repository - Automatically generated protein models database |
| TOPS - Topology cartoons diagrams |
| The Molecules of Life |
生物大分子 数据库
| ESTHER - Esterases, alpha/beta hydrolase enzyme and relatives |
| The Ion Channel Network (ICN) |
| NHGRI/NCBI Histone Sequence Database |
| LIGAND |
| Mol_R_Us - Molecule R Us, browser for PDB |
| MPW - Metabolic pathways |
| PROLYSIS - A protease and protease inhibitor Web server |
酶-代谢数据库
| a protease and protease inhibitor Web server |
| GenLink Multimedia Telomere Resource |
| MEROPS - The MEROPS database provides a wealth of information on proteases. |
| REBASE - restriction enzymes and methylases |
| Telomere & Telomerase Reseach Information |
受体与信息传递数据库
| G-Protein Coupled Receptor Database |
| Olfactory Receptor DataBase |
| ReLiBase - Receptor/ligand complexes database |
| SENTRA : A Database of Sensory Signal Transduction Proteins |
| SMART - Protein signalling and extracellular domain patterns |
蛋白种类关系数据库
| DIP - Database of Interacting Proteins |
遗传变异数据库
| Andogen Receptor Mutations Database |
| Ataxia-Telangiectasia Mutation Database - Virginia Mason Research Center |
| ATbase - A registry of patients with ataxia-telangiectasia |
| ALPSbase - Autoimmune Lymphoproliferative Syndrome Database,a database of mutations causing human ALPS |
| Fanconi Anemia Mutation Database |
| IL2RGbase : Database of Mutations Causing Human X-Linked SCID (XSCID/X-SCID) |
| Immunodeficiency Databases (IDbases) |
| Keio mutation database for human disease gene mutations |
| Mutation Databases - University of Tampere |
| OMIM - Online Mendelian Inheritance in Man |
| PMD - Protein Mutation database |
| p53 Database |
| Tetrahydrobiopterin - BH4 |
其它
| DExH/PROTEIN DATABASE |
| PRINTS - Protein Motif fingerprint database |
| PRESAGE - Collaborative Database of experimental data on proteins |
| ProDom - Protein domain database (Automatically generated) |
| PROSITE - PROSITE dictionary of protein sites and patterns |
本文列举了蛋白相关数据库:除了大家比较熟悉的通用数据库如PDB、PIR,SWISS-PROT ,还有其他的如生物大分子数据库、受体与信息传递数据库,希望大家能受用。
