酵母高分子DNA的提取

Isolation of High Molecular Weight DNA from Yeast For each sample grow 5 ml yeast culture to saturation in YEPD. Pellet cells by spinning at ~2 K for 5 min. in tabletop clinical centrifuge. (Use 15 ml falcon tube ; orange cap) Resuspend cells in 500 µls of H2O and transfer to an eppendorf tube. Spin for 10k 2 min, decant the supernatent then resuspend cells in the residual YEPD by brief vortexing. Add 200 µls of a solution containing : 2% Triton X-100, 1% SDS, 100mM NaCl, 10mM Tris pH 8.0, 1mM EDTA. Add 200 µls phenol / chloroform / isoamyl alcohol (25 / 24 / 1) Add 0.3 g of glass beads (0.45-0.52mm). Use niffty-neato-keen bead cup on syringe. Vortex for 3.5 min.(1 min. if to rescue cen. plasmid for E. coli trans.) Use Tomy® Micromixer. Add 200 µls 1xTE and Spin for 7 min. at 15K. Repeat phenol chloroform extraction (500 µl). Use heavy phase lock Add 1 ml 100% EtOH to aqueous layer, mix by inversion. Spin for 15 min. at 15 K. Resuspend pellet in 400 µls 1xTE + 30 µg RNAse A (3 µl 10 mg/ml of stock) and place at 37oC for 15 min. Add 10 µls of 4M Ammonium Acetate + 1 ml of 100% EtOH + 3 µl glycogen (Roche 20 mg/ml). Mix by inversion. Put at -20C for 20 min. Spin 15 min. at 15K. Wash with 70% EtOH. Dry pellet and resuspend in 50 µls 1xTE. (Use 5-10 µls for Southern).

Buffer for step 5 : 25 mls 5 mls 10 % Triton X-100 2.5 mls 10 % SDS 0.5 ml 5M NaCL 0.25 ml 1M Tris pH 8.0 0.05 ml 0.5M EDTA 16.7 mls H2O